SNPH

COLON - Expression summary

? »

RNA expression

HPA:1.1 FPKM
GTEx:5.1 RPKM

COLON - Immunohistochemistry

? »
 

Antibody staining

Antibody HPA049393

 

Endothelial cells

Low  

Glandular cells

Medium  

Peripheral nerve/ganglion

Low  
 
 

COLON - HPA RNA-seq

? »

Average FPKM

1.1

overview Male, age 54
Sample 1
FPKM: 2.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

5.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.0
Samples: 149

Max RPKM: 12.4
Min RPKM: 2
Std RPKM: 2
Median RPKM: 6.9
GTEX-145MH-2726-SM-5QGQ6 12.4
GTEX-1211K-1826-SM-5EGJ2 12.2
GTEX-YEC3-2026-SM-4WWFL 11.6
GTEX-Z93S-2626-SM-57WBX 11.5
GTEX-131YS-2926-SM-5EGKI 11.2
GTEX-117XS-2226-SM-5GIE1 10.9
GTEX-13G51-2126-SM-5IJD9 10.8
GTEX-13N2G-2226-SM-5IJCU 10.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.3
Samples: 196

Max RPKM: 9.4
Min RPKM: 0.4
Std RPKM: 2.3
Median RPKM: 2.6
GTEX-U3ZH-1326-SM-4DXSF 9.4
GTEX-11WQK-2126-SM-5EQME 8.9
GTEX-13O61-1626-SM-5KM3T 8.8
GTEX-11ZVC-2126-SM-5EGJ1 8.6
GTEX-11GSP-1626-SM-5986N 8.5
GTEX-13VXT-2426-SM-5LU46 8.5
GTEX-X5EB-0926-SM-46MVT 8.4
GTEX-ZYFC-2626-SM-5NQ6S 8.4
Show all