PYGL

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:17.3 FPKM
GTEx:12.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA000962

 

Antibody HPA004119

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Low   Low  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

17.3

overview Male, age 54
Sample 1
FPKM: 13.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 20.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 10.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 11.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 20.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 16.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 27.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

12.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 11.3
Samples: 149

Max RPKM: 22.3
Min RPKM: 4.5
Std RPKM: 3.5
Median RPKM: 10.5
GTEX-WI4N-2226-SM-4OOS9 22.3
GTEX-14C39-1626-SM-5S2P4 22.2
GTEX-11TT1-0926-SM-5GU5M 22.0
GTEX-13OVJ-1826-SM-5KM2D 20.0
GTEX-145LS-2926-SM-5O99G 19.9
GTEX-131XG-1526-SM-5GCNQ 19.0
GTEX-ZAB4-2426-SM-5HL8A 18.9
GTEX-12WSL-1826-SM-5LZW9 17.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 13.1
Samples: 196

Max RPKM: 65.4
Min RPKM: 2.7
Std RPKM: 6.5
Median RPKM: 11.7
GTEX-14C38-2626-SM-5RQI4 65.4
GTEX-13W3W-2126-SM-5K7UX 37.4
GTEX-PWOO-1326-SM-48TCJ 27.4
GTEX-QDVN-1326-SM-48TZ3 26.9
GTEX-XAJ8-0426-SM-47JYJ 26.6
GTEX-QLQ7-1126-SM-4R1KN 26.2
GTEX-U3ZN-2126-SM-4DXU1 25.4
GTEX-T5JW-1126-SM-4DM5V 24.1
Show all