SMARCB1

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:28.5 FPKM
GTEx:24.2 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Medium
Keratinocytes:Medium
Langerhans:Low
Melanocytes:Medium
 

Antibody staining

Antibody HPA018248

 

Antibody HPA019127

 

Antibody CAB009196

 

Fibroblasts

Medium   Low   Low  

Keratinocytes

Medium   Medium   Medium  

Langerhans

Low   Low   Low  

Melanocytes

Medium   Low   Not detected  
     
     
     

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:High
 
 
 
 

Antibody staining

Antibody HPA018248

 

Antibody HPA019127

 

Antibody CAB009196

 

Epidermal cells

High   High   Medium  
        
        
        
     
     
     

SKIN - HPA RNA-seq

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Average FPKM

28.5

overview Female, age 34
Sample 1
FPKM: 30.9
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 27.7
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 26.8

SKIN - GTEx RNA-seq

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Average RPKM

24.2

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 24.0
Samples: 250

Max RPKM: 37
Min RPKM: 15
Std RPKM: 4
Median RPKM: 23.9
GTEX-X585-2426-SM-46MW2 37.0
GTEX-13112-0126-SM-5P9IU 36.2
GTEX-XQ3S-1426-SM-4BOPR 35.0
GTEX-11DYG-1526-SM-5A5JS 34.2
GTEX-13OW5-2326-SM-5L3HO 33.7
GTEX-XOTO-0726-SM-4B659 32.1
GTEX-ZAK1-0626-SM-5HL8E 32.0
GTEX-11WQC-1826-SM-5GU59 31.9
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 24.4
Samples: 357

Max RPKM: 37.7
Min RPKM: 12.6
Std RPKM: 4.2
Median RPKM: 23.8
GTEX-ZYFD-0126-SM-5GIDL 37.7
GTEX-139UW-2826-SM-5L3E7 37.0
GTEX-U8T8-0126-SM-3DB94 36.3
GTEX-XOTO-0126-SM-4B66N 36.0
GTEX-Y3IK-2426-SM-4WWDU 34.6
GTEX-11DXZ-2326-SM-5EGGV 34.4
GTEX-S7SF-1626-SM-3K2AY 33.7
GTEX-XQ3S-1526-SM-4BOOC 33.4
Show all