GPATCH2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:3.7 FPKM
GTEx:1.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA027181

 

Antibody HPA027322

 

Endothelial cells

Medium   Medium  

Glandular cells

High   High  

Peripheral nerve/ganglion

Medium   Medium  
   
   

COLON - HPA RNA-seq

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Average FPKM

3.7

overview Male, age 54
Sample 1
FPKM: 3.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 4.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 4.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 3.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 3.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.5
Samples: 149

Max RPKM: 3.2
Min RPKM: 0.9
Std RPKM: 0.3
Median RPKM: 1.5
GTEX-14E6C-2226-SM-5QGQG 3.2
GTEX-13OW6-2226-SM-5N9FL 2.6
GTEX-11WQK-2526-SM-5CVL8 2.5
GTEX-11DXY-2026-SM-5N9CZ 2.4
GTEX-13PVQ-2726-SM-5L3H7 2.2
GTEX-X4EO-2726-SM-4E3HS 2.2
GTEX-Y9LG-1326-SM-4VBQB 2.2
GTEX-YJ8O-1426-SM-5PNV9 2.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.4
Samples: 196

Max RPKM: 2.5
Min RPKM: 0.4
Std RPKM: 0.3
Median RPKM: 1.3
GTEX-13OW6-2126-SM-5N9GL 2.5
GTEX-11TUW-2026-SM-5EQL8 2.2
GTEX-11WQK-2126-SM-5EQME 2.1
GTEX-13O3O-2526-SM-5L3DR 2.1
GTEX-148VJ-2626-SM-5QGPI 2.1
GTEX-R53T-1326-SM-48FCQ 2.1
GTEX-13FHP-2426-SM-5KLZ5 2.0
GTEX-PWOO-1326-SM-48TCJ 2.0
Show all