TF

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:0.6 FPKM
GTEx:1.4 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001527

 

Antibody HPA005692

 

Antibody CAB009538

 

Endothelial cells

Low   Medium   Low  

Glandular cells

Low   Low   Medium  

Peripheral nerve/ganglion

Not detected   Medium   Not detected  
     
     
     

COLON - HPA RNA-seq

? »

Average FPKM

0.6

overview Male, age 54
Sample 1
FPKM: 0.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 2.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

1.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.8
Samples: 149

Max RPKM: 4.4
Min RPKM: 0.1
Std RPKM: 0.9
Median RPKM: 1.6
GTEX-YJ8O-1426-SM-5PNV9 4.4
GTEX-12WSD-2626-SM-5EGJE 4.3
GTEX-12ZZY-2726-SM-5EQ45 4.1
GTEX-145MH-2726-SM-5QGQ6 3.9
GTEX-11DXY-2026-SM-5N9CZ 3.8
GTEX-13OW6-2226-SM-5N9FL 3.8
GTEX-145MO-2626-SM-5QGPD 3.8
GTEX-11PRG-2026-SM-5GU5F 3.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.1
Samples: 196

Max RPKM: 7.8
Min RPKM: 0.1
Std RPKM: 1
Median RPKM: 0.7
GTEX-13W3W-2126-SM-5K7UX 7.8
GTEX-117YW-1826-SM-5PNY5 6.7
GTEX-14BMV-2426-SM-5S2PP 4.8
GTEX-145LS-2726-SM-5Q5D8 4.6
GTEX-13O3O-2526-SM-5L3DR 4.1
GTEX-12ZZZ-2426-SM-5GCNN 4.0
GTEX-13FHP-2426-SM-5KLZ5 3.9
GTEX-145MO-2426-SM-5NQ9W 3.4
Show all