ITGA6

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:60.1 FPKM
GTEx:15.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA012696

 

Antibody HPA027582

 

Antibody CAB009009

 

Endothelial cells

Not detected   Medium   Medium  

Glandular cells

Medium   Medium   Medium  

Peripheral nerve/ganglion

Not detected   Not available   Medium  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

60.1

overview Male, age 54
Sample 1
FPKM: 64.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 62.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 80.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 50.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 76.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 30.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 56.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

15.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.4
Samples: 149

Max RPKM: 30.4
Min RPKM: 1.7
Std RPKM: 4.4
Median RPKM: 6.6
GTEX-145LS-2926-SM-5O99G 30.4
GTEX-13X6K-2726-SM-5O9DG 27.7
GTEX-13SLW-2826-SM-5Q5ES 21.2
GTEX-147GR-2826-SM-5RQK8 20.4
GTEX-YJ8A-1726-SM-5P9IQ 19.1
GTEX-11PRG-2026-SM-5GU5F 16.2
GTEX-WFON-1326-SM-4LVMN 15.1
GTEX-12ZZY-2726-SM-5EQ45 14.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 24.4
Samples: 196

Max RPKM: 93.9
Min RPKM: 2.3
Std RPKM: 14.3
Median RPKM: 24.5
GTEX-144GM-1226-SM-5LU52 93.9
GTEX-11TT1-1026-SM-5PNW7 81.9
GTEX-S4Q7-0826-SM-4AD5E 63.9
GTEX-111CU-1426-SM-5GZYP 58.9
GTEX-PWOO-1326-SM-48TCJ 52.3
GTEX-XMK1-1726-SM-4B64Z 50.6
GTEX-ZPU1-1926-SM-57WDT 49.5
GTEX-117YW-1826-SM-5PNY5 48.3
Show all