USP48

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:17.1 FPKM
GTEx:9.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA030045

 

Antibody HPA030046

 

Endothelial cells

Medium   Low  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Medium   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

17.1

overview Male, age 54
Sample 1
FPKM: 15.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 18.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 18.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 14.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 18.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 16.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 18.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

9.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 9.3
Samples: 149

Max RPKM: 16.3
Min RPKM: 5.6
Std RPKM: 1.5
Median RPKM: 9.2
GTEX-14E6C-2226-SM-5QGQG 16.3
GTEX-13X6I-2726-SM-5Q5ET 15.5
GTEX-145ME-1126-SM-5SIAT 12.4
GTEX-1477Z-2126-SM-5Q5CM 12.1
GTEX-131XE-1026-SM-5EGKE 12.0
GTEX-13OW8-2726-SM-5L3FZ 11.7
GTEX-13U4I-2626-SM-5SI9C 11.6
GTEX-13SLW-2826-SM-5Q5ES 11.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.0
Samples: 196

Max RPKM: 16.5
Min RPKM: 5.1
Std RPKM: 1.4
Median RPKM: 8.9
GTEX-13OVJ-1726-SM-5IJDZ 16.5
GTEX-13O3O-2526-SM-5L3DR 14.1
GTEX-ZAB4-2226-SM-5HL97 13.9
GTEX-13U4I-2426-SM-5LU34 13.8
GTEX-14AS3-1126-SM-5Q5CR 13.4
GTEX-11P81-1126-SM-5GU5G 12.5
GTEX-12KS4-2426-SM-5LU8P 12.0
GTEX-13OVI-2026-SM-5J1MU 12.0
Show all