MCOLN1

SOFT TISSUE - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:11.8 FPKM
GTEx:18.3 RPKM

SOFT TISSUE 1 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not available
Fibroblasts:Low
Peripheral nerve:Not available

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA031763

 

Antibody CAB032637

 

Adipocytes

Not detected   Medium  

Chondrocytes

Not available   Not available  

Fibroblasts

Low   Medium  

Peripheral nerve

Not available   Not available  
   
   
   

SOFT TISSUE 2 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not available
Fibroblasts:Low
Peripheral nerve:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA031763

 

Antibody CAB032637

 

Adipocytes

Not detected   Medium  

Chondrocytes

Not available   Medium  

Fibroblasts

Low   Medium  

Peripheral nerve

Not detected   Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

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Average FPKM

11.8

N/A Female, age 80
Sample 1
FPKM: 12.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
FPKM: 7.0
N/A Female, age 57
Sample 3
FPKM: 6.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
FPKM: 13.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
FPKM: 20.0
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

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Average RPKM

18.3

GTEx sample id

RPKM

 

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 18.2
Samples: 350

Max RPKM: 41.7
Min RPKM: 8.2
Std RPKM: 5.3
Median RPKM: 17.3
GTEX-13NYS-0226-SM-5MR49 41.7
GTEX-11GSO-2326-SM-5A5LX 35.6
GTEX-QDT8-0226-SM-32PL4 34.5
GTEX-OOBK-0226-SM-2YUMF 34.1
GTEX-13NZA-0126-SM-5K7UH 32.9
GTEX-111VG-2326-SM-5N9BK 32.8
GTEX-11I78-2626-SM-5Q5AI 32.1
GTEX-Y5V5-2426-SM-5IFJA 31.3
Show all
 

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 18.4
Samples: 227

Max RPKM: 49.9
Min RPKM: 8
Std RPKM: 6
Median RPKM: 17.3
GTEX-131XF-0726-SM-5GIE5 49.9
GTEX-132AR-0526-SM-5J2MJ 39.6
GTEX-ZE9C-1326-SM-5S2OW 37.3
GTEX-139D8-1626-SM-5IJFZ 37.2
GTEX-ZPCL-1026-SM-5GCOX 37.1
GTEX-13PL7-1226-SM-5SIAR 34.9
GTEX-131XG-0126-SM-5K7UJ 34.3
GTEX-ZVT2-0226-SM-5GIE3 33.2
Show all