SPTLC1

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:24.7 FPKM
GTEx:12.7 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Medium
Keratinocytes:Medium
Langerhans:Medium
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA010860

 

Antibody CAB018747

 

Fibroblasts

Low   Medium  

Keratinocytes

High   Medium  

Langerhans

High   Medium  

Melanocytes

High   Medium  
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 
 

Antibody staining

Antibody HPA010860

 

Antibody CAB018747

 

Epidermal cells

Medium   Medium  
      
      
      
   
   

SKIN - HPA RNA-seq

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Average FPKM

24.7

overview Female, age 34
Sample 1
FPKM: 27.3
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 29.5
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 17.2

SKIN - GTEx RNA-seq

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Average RPKM

12.7

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 12.4
Samples: 250

Max RPKM: 18.1
Min RPKM: 6.2
Std RPKM: 2.2
Median RPKM: 12.5
GTEX-13X6J-0626-SM-5LU5F 18.1
GTEX-14A6H-2026-SM-5Q5DD 17.7
GTEX-11TUW-0626-SM-5LU9M 17.5
GTEX-13O3O-2326-SM-5IJD6 17.5
GTEX-139UW-0326-SM-5J1ML 17.2
GTEX-14B4R-1326-SM-5Q5EZ 16.7
GTEX-14C38-0726-SM-5SI6M 16.5
GTEX-1497J-0226-SM-5QGPU 16.4
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 13.0
Samples: 357

Max RPKM: 21.1
Min RPKM: 7.2
Std RPKM: 2.3
Median RPKM: 12.8
GTEX-S32W-2126-SM-2XCB1 21.1
GTEX-P44H-0226-SM-2XCEU 20.2
GTEX-11H98-0126-SM-5EGHG 18.0
GTEX-ZPIC-1726-SM-57WF2 18.0
GTEX-148VI-1626-SM-5SI6E 17.9
GTEX-12WSG-2826-SM-5FQUS 17.7
GTEX-13FTX-1826-SM-5J1NX 17.7
GTEX-VJWN-0126-SM-3GIK7 17.6
Show all