SPTLC1

SOFT TISSUE - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:23.4 FPKM
GTEx:10.7 RPKM

SOFT TISSUE 1 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Not available
Fibroblasts:Medium
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA010860

 

Antibody CAB018747

 

Adipocytes

Low   Medium  

Chondrocytes

Not available   Not available  

Fibroblasts

Low   Medium  

Peripheral nerve

Not detected   Not detected  
   
   
   

SOFT TISSUE 2 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Not available
Fibroblasts:Low
Peripheral nerve:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA010860

 

Antibody CAB018747

 

Adipocytes

Low   Medium  

Chondrocytes

Not available   Not available  

Fibroblasts

Not detected   Medium  

Peripheral nerve

Not detected   Not available  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

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Average FPKM

23.4

N/A Female, age 80
Sample 1
FPKM: 20.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
FPKM: 24.2
N/A Female, age 57
Sample 3
FPKM: 22.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
FPKM: 26.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
FPKM: 23.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

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Average RPKM

10.7

GTEx sample id

RPKM

 

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 11.2
Samples: 350

Max RPKM: 19
Min RPKM: 6.8
Std RPKM: 1.4
Median RPKM: 11.1
GTEX-POYW-0726-SM-2XCEO 19.0
GTEX-P44H-0326-SM-2XCES 16.1
GTEX-QEL4-0326-SM-3GAE5 15.9
GTEX-REY6-0326-SM-2TF5A 15.0
GTEX-OIZI-0226-SM-2XCEE 14.7
GTEX-SN8G-0226-SM-4DM6B 14.7
GTEX-O5YT-0226-SM-32PK5 14.5
GTEX-U3ZN-2626-SM-3DB7T 14.4
Show all
 

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 10.2
Samples: 227

Max RPKM: 15.3
Min RPKM: 6.5
Std RPKM: 1.6
Median RPKM: 10.3
GTEX-145ME-0726-SM-5O9A3 15.3
GTEX-14753-2526-SM-5LU97 14.7
GTEX-WFJO-1026-SM-3GIKL 14.6
GTEX-13W46-1226-SM-5SIAS 14.3
GTEX-117YX-0726-SM-5GIET 14.1
GTEX-ZAB5-1126-SM-5Q5AD 14.0
GTEX-ZT9X-0926-SM-5O9C4 13.6
GTEX-11P7K-0826-SM-5BC5F 13.5
Show all