GANAB

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:43.5 FPKM
GTEx:53.9 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Not detected
Langerhans:Medium
Melanocytes:High

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA026874

 

Antibody HPA061426

 

Fibroblasts

Medium   Low  

Keratinocytes

Low   Not detected  

Langerhans

Medium   Medium  

Melanocytes

Not detected   High  
   
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 
 

Antibody staining

Antibody HPA026874

 

Antibody HPA061426

 

Epidermal cells

Low   Medium  
      
      
      
   
   
   

SKIN - HPA RNA-seq

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Average FPKM

43.5

overview Female, age 34
Sample 1
FPKM: 48.2
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 50.8
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 31.6

SKIN - GTEx RNA-seq

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Average RPKM

53.9

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 54.6
Samples: 250

Max RPKM: 74.1
Min RPKM: 34.6
Std RPKM: 7.7
Median RPKM: 53.8
GTEX-132AR-0326-SM-5KM2C 74.1
GTEX-W5X1-2526-SM-3GILC 74.0
GTEX-11P7K-1126-SM-5HL4L 73.9
GTEX-X585-2426-SM-46MW2 73.9
GTEX-ZYVF-0926-SM-5E44J 73.9
GTEX-12WSL-2026-SM-5GCML 73.8
GTEX-WEY5-2326-SM-3GIKK 73.6
GTEX-ZYWO-2226-SM-5GZXR 72.6
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 53.1
Samples: 357

Max RPKM: 79.1
Min RPKM: 31.8
Std RPKM: 7.5
Median RPKM: 52.2
GTEX-12WSN-2326-SM-5DUVG 79.1
GTEX-XYKS-2126-SM-4E3IB 78.2
GTEX-PWN1-0126-SM-2I3FK 73.9
GTEX-QDVN-2026-SM-3GAEP 72.4
GTEX-12WSK-2326-SM-5GCOH 71.4
GTEX-ZTPG-0326-SM-5O9AX 70.7
GTEX-P4QR-0326-SM-5SI8P 70.3
GTEX-VJYA-1126-SM-3GIJU 70.1
Show all