TGDS

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:4.2 FPKM
GTEx:4.1 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Low
Langerhans:Low
Melanocytes:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA039927

 

Antibody HPA040857

 

Fibroblasts

Not detected   Medium  

Keratinocytes

Medium   Low  

Langerhans

Not detected   Medium  

Melanocytes

Low   High  
   
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Low
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA039927

 

Antibody HPA040857

 

Epidermal cells

Medium   Not detected  
      
      
      
   
   
   

SKIN - HPA RNA-seq

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Average FPKM

4.2

overview Female, age 34
Sample 1
FPKM: 4.8
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 4.7
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 3.2

SKIN - GTEx RNA-seq

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Average RPKM

4.1

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 4.2
Samples: 250

Max RPKM: 10.1
Min RPKM: 1.5
Std RPKM: 1.4
Median RPKM: 4
GTEX-ZVTK-0226-SM-51MRG 10.1
GTEX-ZVE1-0726-SM-51MRN 8.9
GTEX-Y5V5-0126-SM-5S2NW 8.4
GTEX-145MF-0926-SM-5Q5EA 8.0
GTEX-11UD2-2526-SM-5CVNU 7.8
GTEX-13NZ8-1226-SM-5KM4A 7.5
GTEX-14A6H-2026-SM-5Q5DD 7.4
GTEX-12WSC-2826-SM-5BC5Y 7.3
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 3.9
Samples: 357

Max RPKM: 8
Min RPKM: 1.1
Std RPKM: 1.2
Median RPKM: 3.9
GTEX-145LS-0126-SM-5QGP1 8.0
GTEX-U3ZN-2326-SM-3DB7W 7.8
GTEX-V1D1-2226-SM-3NMAX 7.6
GTEX-TMMY-0226-SM-33HBA 7.5
GTEX-13NYC-0326-SM-5K7WP 7.4
GTEX-Y8LW-1826-SM-5S2MV 7.1
GTEX-13N2G-2626-SM-5J1OT 6.9
GTEX-S32W-2126-SM-2XCB1 6.9
Show all