TGDS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.3 FPKM
GTEx:4.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA039927

 

Antibody HPA040857

 

Endothelial cells

Low   Medium  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Not available   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

6.3

overview Male, age 54
Sample 1
FPKM: 6.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 7.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 6.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 6.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 4.5
Samples: 149

Max RPKM: 7.3
Min RPKM: 2.1
Std RPKM: 1
Median RPKM: 4.4
GTEX-11DXY-2026-SM-5N9CZ 7.3
GTEX-1477Z-2126-SM-5Q5CM 7.3
GTEX-148VJ-2426-SM-5NQ9Y 7.1
GTEX-12ZZY-2726-SM-5EQ45 6.6
GTEX-ZAJG-2626-SM-5S2NU 6.6
GTEX-13SLW-2826-SM-5Q5ES 6.5
GTEX-13X6K-2726-SM-5O9DG 6.5
GTEX-14A5I-2426-SM-5Q5CP 6.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.0
Samples: 196

Max RPKM: 7.9
Min RPKM: 1.6
Std RPKM: 1
Median RPKM: 4.9
GTEX-PWOO-1326-SM-48TCJ 7.9
GTEX-11TT1-1026-SM-5PNW7 7.8
GTEX-133LE-1526-SM-5IFEN 7.6
GTEX-13OVJ-1726-SM-5IJDZ 7.6
GTEX-13OW6-2126-SM-5N9GL 7.6
GTEX-OXRK-1726-SM-3NB16 7.6
GTEX-147F3-1926-SM-5SIB9 7.3
GTEX-11O72-2226-SM-5PNW2 7.0
Show all