ATG16L1

SOFT TISSUE - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:5.0 FPKM
GTEx:7.9 RPKM

SOFT TISSUE 1 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Low
Fibroblasts:Low
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA063900

 

Adipocytes

Not detected  

Chondrocytes

Low  

Fibroblasts

Low  

Peripheral nerve

Not detected  
 
 
 

SOFT TISSUE 2 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not available
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA063900

 

Adipocytes

Low  

Chondrocytes

Not available  

Fibroblasts

Not detected  

Peripheral nerve

Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

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Average FPKM

5.0

N/A Female, age 80
Sample 1
FPKM: 3.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
FPKM: 6.0
N/A Female, age 57
Sample 3
FPKM: 5.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
FPKM: 5.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
FPKM: 4.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

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Average RPKM

7.9

GTEx sample id

RPKM

 

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 8.2
Samples: 350

Max RPKM: 12.1
Min RPKM: 4.1
Std RPKM: 1.1
Median RPKM: 8.2
GTEX-RWSA-0226-SM-2XCBA 12.1
GTEX-139TU-0226-SM-5J1NM 11.4
GTEX-12WSA-0326-SM-5BC6I 11.3
GTEX-X261-0226-SM-3NMD2 11.2
GTEX-OXRO-0226-SM-3LK6F 11.0
GTEX-S7SE-0226-SM-2XCD4 11.0
GTEX-11EMC-2826-SM-5PNY6 10.9
GTEX-QEL4-0326-SM-3GAE5 10.7
Show all
 

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 7.5
Samples: 227

Max RPKM: 12.6
Min RPKM: 3.3
Std RPKM: 1.5
Median RPKM: 7.4
GTEX-11WQK-1526-SM-5EGKN 12.6
GTEX-13IVO-2426-SM-5K7V9 12.5
GTEX-13S7M-0826-SM-5QGQX 11.6
GTEX-13QBU-1326-SM-5LU4K 11.5
GTEX-11NV4-1426-SM-5BC4W 11.3
GTEX-132Q8-1726-SM-5EGK8 10.7
GTEX-139TU-1426-SM-5LZY9 10.4
GTEX-117YW-0826-SM-5H11O 10.3
Show all