PREP

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:35.3 FPKM
GTEx:14.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA031388

 

Antibody HPA031389

 

Antibody HPA031390

 

Antibody CAB025414

 

Endothelial cells

Medium   Medium   Low   Medium  

Glandular cells

High   High   Medium   High  

Peripheral nerve/ganglion

High   Medium   Medium   Medium  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

35.3

overview Male, age 54
Sample 1
FPKM: 33.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 39.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 39.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 22.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 33.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 32.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 46.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

14.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 9.2
Samples: 149

Max RPKM: 16.3
Min RPKM: 4.3
Std RPKM: 2.2
Median RPKM: 8.8
GTEX-XBED-1726-SM-47JYO 16.3
GTEX-1399U-2226-SM-5KLZI 14.4
GTEX-Y5LM-1426-SM-5RQJL 14.3
GTEX-145ME-1126-SM-5SIAT 14.0
GTEX-ZG7Y-1826-SM-4WWD3 14.0
GTEX-13FH7-1626-SM-5J2O9 13.6
GTEX-14E6E-1726-SM-5S2R6 13.6
GTEX-V955-1726-SM-4JBHF 13.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 19.8
Samples: 196

Max RPKM: 47.5
Min RPKM: 2.4
Std RPKM: 8.6
Median RPKM: 21.3
GTEX-11TT1-1026-SM-5PNW7 47.5
GTEX-144GM-1226-SM-5LU52 43.5
GTEX-PWOO-1326-SM-48TCJ 36.2
GTEX-XV7Q-2126-SM-4BRVX 36.0
GTEX-T5JW-1126-SM-4DM5V 35.2
GTEX-OXRK-1726-SM-3NB16 34.4
GTEX-146FQ-1926-SM-5NQBY 34.3
GTEX-U3ZN-2126-SM-4DXU1 34.1
Show all