NOA1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:8.3 FPKM
GTEx:16.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA035838

 

Antibody HPA035839

 

Endothelial cells

Medium   Medium  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Not available   Medium  
   
   

COLON - HPA RNA-seq

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Average FPKM

8.3

overview Male, age 54
Sample 1
FPKM: 9.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 9.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 10.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 5.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 8.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

16.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 14.9
Samples: 149

Max RPKM: 31.9
Min RPKM: 6
Std RPKM: 4.2
Median RPKM: 14.5
GTEX-1399U-2226-SM-5KLZI 31.9
GTEX-11P81-1426-SM-5P9JN 26.8
GTEX-ZT9W-1726-SM-51MS3 25.3
GTEX-ZVT2-1726-SM-51MRO 25.3
GTEX-XUZC-1526-SM-4BRV4 24.9
GTEX-13OVI-2126-SM-5KM3U 24.2
GTEX-WFG8-1726-SM-4LVM6 22.8
GTEX-145ME-1126-SM-5SIAT 22.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 17.1
Samples: 196

Max RPKM: 28
Min RPKM: 7.5
Std RPKM: 3.8
Median RPKM: 17.1
GTEX-1128S-1626-SM-5H12O 28.0
GTEX-ZPIC-2226-SM-57WDX 26.8
GTEX-WFG7-1526-SM-4LVMG 25.7
GTEX-11TTK-2426-SM-5PNYO 25.6
GTEX-O5YW-1426-SM-3MJHF 25.3
GTEX-12BJ1-2126-SM-5BC5O 25.2
GTEX-UJMC-1326-SM-4IHLS 25.1
GTEX-T6MO-0826-SM-4DM51 24.2
Show all