CDH17

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:192.8 FPKM
GTEx:51.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA023614

 

Antibody HPA023616

 

Antibody HPA026556

 

Antibody CAB025143

 

Endothelial cells

Not detected   Not detected   Not detected   Not detected  

Glandular cells

High   High   High   High  

Peripheral nerve/ganglion

Low   Not detected   Not detected   Not detected  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

192.8

overview Male, age 54
Sample 1
FPKM: 129.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 220.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 247.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 221.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 124.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 125.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 281.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

51.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.4
Samples: 149

Max RPKM: 31.5
Min RPKM: 0
Std RPKM: 4
Median RPKM: 0.3
GTEX-XBED-1726-SM-47JYO 31.5
GTEX-Y5LM-1426-SM-5RQJL 22.3
GTEX-YEC3-2026-SM-4WWFL 19.3
GTEX-V955-1726-SM-4JBHF 15.3
GTEX-11ONC-1926-SM-5GU75 11.8
GTEX-YJ8A-1726-SM-5P9IQ 8.9
GTEX-146FH-2426-SM-5Q5EW 8.7
GTEX-11EQ9-1526-SM-5PNY7 8.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 102.4
Samples: 196

Max RPKM: 267.9
Min RPKM: 0
Std RPKM: 79.5
Median RPKM: 119.4
GTEX-131XG-1826-SM-5LZV4 267.9
GTEX-111CU-1426-SM-5GZYP 260.0
GTEX-14E6E-1526-SM-5RQIG 243.4
GTEX-144GM-1226-SM-5LU52 240.7
GTEX-1122O-1526-SM-5N9CL 231.1
GTEX-11P82-1026-SM-5BC5J 229.3
GTEX-R55G-1226-SM-48FDC 226.3
GTEX-U3ZN-2126-SM-4DXU1 222.1
Show all