MCAM

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:45.2 FPKM
GTEx:58.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:Not detected
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA008848

 

Antibody CAB002147

 

Endothelial cells

High   High  

Glandular cells

Low   Not detected  

Peripheral nerve/ganglion

High   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

45.2

overview Male, age 54
Sample 1
FPKM: 23.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 19.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 14.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 55.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 32.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 147.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 22.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

58.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 74.8
Samples: 149

Max RPKM: 124.9
Min RPKM: 31
Std RPKM: 16.8
Median RPKM: 73.7
GTEX-YEC3-2026-SM-4WWFL 124.9
GTEX-12696-1926-SM-5EGJT 120.5
GTEX-11TUW-2326-SM-5EQMO 115.2
GTEX-14A5H-1626-SM-5SIAN 113.3
GTEX-11ZTT-1626-SM-5EQKR 112.2
GTEX-13O1R-2426-SM-5KLZZ 108.7
GTEX-13G51-2126-SM-5IJD9 107.7
GTEX-XAJ8-0726-SM-47JY5 107.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 43.0
Samples: 196

Max RPKM: 211
Min RPKM: 3.5
Std RPKM: 37.4
Median RPKM: 29.4
GTEX-13W3W-2126-SM-5K7UX 211.0
GTEX-13OVG-1426-SM-5K7VP 200.7
GTEX-11TUW-2026-SM-5EQL8 159.2
GTEX-13OVI-2026-SM-5J1MU 144.5
GTEX-XAJ8-0426-SM-47JYJ 136.1
GTEX-Z93S-2426-SM-5HL8N 135.1
GTEX-11GSP-1626-SM-5986N 115.8
GTEX-13O3P-2326-SM-5KM55 115.7
Show all