CLNS1A

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:57.6 FPKM
GTEx:11.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA031707

 

Antibody HPA031708

 

Antibody HPA032045

 

Antibody CAB017840

 

Endothelial cells

Not detected   Medium   Not detected   Not detected  

Glandular cells

High   Medium   Low   Medium  

Peripheral nerve/ganglion

Not detected   Low   Not detected   Medium  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

57.6

overview Male, age 54
Sample 1
FPKM: 49.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 68.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 54.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 35.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 61.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 58.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 74.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

11.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 10.4
Samples: 149

Max RPKM: 13.3
Min RPKM: 7
Std RPKM: 1.2
Median RPKM: 10.3
GTEX-11TT1-0926-SM-5GU5M 13.3
GTEX-12696-1926-SM-5EGJT 13.3
GTEX-13SLW-2826-SM-5Q5ES 13.3
GTEX-146FH-2426-SM-5Q5EW 13.2
GTEX-13X6K-2726-SM-5O9DG 13.1
GTEX-145LS-2926-SM-5O99G 13.1
GTEX-12ZZY-2726-SM-5EQ45 13.0
GTEX-ZF28-2526-SM-57WFH 12.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 12.1
Samples: 196

Max RPKM: 18.6
Min RPKM: 6.6
Std RPKM: 1.9
Median RPKM: 12.1
GTEX-1128S-1626-SM-5H12O 18.6
GTEX-139TS-1926-SM-5IJFO 18.0
GTEX-XV7Q-2126-SM-4BRVX 16.8
GTEX-147F3-1926-SM-5SIB9 16.1
GTEX-U3ZN-2126-SM-4DXU1 16.0
GTEX-1399R-2226-SM-5P9JB 15.8
GTEX-146FQ-1926-SM-5NQBY 15.7
GTEX-12C56-0626-SM-5EGGC 15.3
Show all