NSF

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:18.4 FPKM
GTEx:8.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA003154

 

Antibody CAB009324

 

Antibody CAB013645

 

Endothelial cells

Not available   Medium   Medium  

Glandular cells

Medium   Medium   High  

Peripheral nerve/ganglion

Not available   Not available   High  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

18.4

overview Male, age 54
Sample 1
FPKM: 17.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 20.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 21.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 13.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 21.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 14.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 20.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

8.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 6.6
Samples: 149

Max RPKM: 10.3
Min RPKM: 3.1
Std RPKM: 1.2
Median RPKM: 6.6
GTEX-11WQK-2526-SM-5CVL8 10.3
GTEX-12WSJ-1426-SM-5GCON 9.8
GTEX-131XG-1526-SM-5GCNQ 9.8
GTEX-11TT1-0926-SM-5GU5M 9.7
GTEX-YJ8A-1726-SM-5P9IQ 9.7
GTEX-13O1R-2426-SM-5KLZZ 9.3
GTEX-12696-1926-SM-5EGJT 8.9
GTEX-1122O-1426-SM-5H11R 8.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 11.0
Samples: 196

Max RPKM: 20.9
Min RPKM: 2.6
Std RPKM: 3.4
Median RPKM: 11
GTEX-145MN-1726-SM-5SIA6 20.9
GTEX-ZV7C-1526-SM-5NQ72 20.3
GTEX-11P82-1026-SM-5BC5J 18.9
GTEX-QV31-0826-SM-4R1KR 18.1
GTEX-TML8-1326-SM-4DXTO 17.6
GTEX-11DXZ-1726-SM-5H12M 17.3
GTEX-132AR-2726-SM-5PNVN 17.2
GTEX-1399R-2226-SM-5P9JB 17.1
Show all