GAL

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:4.2 FPKM
GTEx:5.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:High

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA049864

 

Antibody CAB000462

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Not detected   Low  

Peripheral nerve/ganglion

Medium   High  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

4.2

overview Male, age 54
Sample 1
FPKM: 2.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 3.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 6.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 7.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.5
Samples: 149

Max RPKM: 64.8
Min RPKM: 0
Std RPKM: 7.1
Median RPKM: 5.6
GTEX-WFON-1326-SM-4LVMN 64.8
GTEX-ZYY3-2226-SM-5E45A 29.8
GTEX-13OVJ-1826-SM-5KM2D 23.6
GTEX-12ZZW-2426-SM-5DUWE 22.7
GTEX-139D8-2926-SM-5IJBM 21.9
GTEX-13OW6-2226-SM-5N9FL 21.5
GTEX-11EI6-2626-SM-5PNVT 19.9
GTEX-ZVT4-2626-SM-5N9GJ 18.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.6
Samples: 196

Max RPKM: 26.4
Min RPKM: 0.1
Std RPKM: 4.1
Median RPKM: 2
GTEX-14BMV-2426-SM-5S2PP 26.4
GTEX-12ZZZ-2426-SM-5GCNN 22.6
GTEX-13FHP-2426-SM-5KLZ5 21.2
GTEX-ZXES-1626-SM-5NQ7L 20.2
GTEX-11WQK-2126-SM-5EQME 14.4
GTEX-147JS-2526-SM-5S2Q8 14.3
GTEX-145MO-2426-SM-5NQ9W 11.9
GTEX-13O3P-2326-SM-5KM55 11.8
Show all