PYGM

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:3.7 FPKM
GTEx:11.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA056003

 

Endothelial cells

Low  

Glandular cells

Low  

Peripheral nerve/ganglion

Not detected  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

3.7

overview Male, age 54
Sample 1
FPKM: 1.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 2.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 1.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 16.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

11.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 16.4
Samples: 149

Max RPKM: 51.9
Min RPKM: 2.2
Std RPKM: 8.9
Median RPKM: 15
GTEX-13CF2-1826-SM-5N9GK 51.9
GTEX-13G51-2126-SM-5IJD9 42.6
GTEX-117XS-2226-SM-5GIE1 40.7
GTEX-11DXZ-1626-SM-5GIDI 40.1
GTEX-11GS4-1826-SM-5HL4T 38.9
GTEX-YECK-2826-SM-5IFHF 36.9
GTEX-131XE-1026-SM-5EGKE 35.1
GTEX-1212Z-1826-SM-5FQSH 33.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 6.8
Samples: 196

Max RPKM: 41.3
Min RPKM: 0.1
Std RPKM: 6.7
Median RPKM: 5.2
GTEX-11GSP-1626-SM-5986N 41.3
GTEX-11ZVC-2126-SM-5EGJ1 32.8
GTEX-U3ZH-1326-SM-4DXSF 28.8
GTEX-ZYFC-2626-SM-5NQ6S 26.1
GTEX-13OW5-2626-SM-5MR3M 21.1
GTEX-Y3I4-1426-SM-4TT9C 19.7
GTEX-SNMC-1126-SM-4DM5M 19.5
GTEX-13OW6-2126-SM-5N9GL 19.0
Show all