ARFGEF1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:16.1 FPKM
GTEx:8.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA023399

 

Antibody HPA023822

 

Endothelial cells

Medium   Low  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Medium   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

16.1

overview Male, age 54
Sample 1
FPKM: 19.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 20.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 21.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 12.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 14.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 9.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 15.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

8.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.0
Samples: 149

Max RPKM: 9.7
Min RPKM: 4.1
Std RPKM: 0.9
Median RPKM: 7
GTEX-145ME-1126-SM-5SIAT 9.7
GTEX-131XG-1526-SM-5GCNQ 9.6
GTEX-11ZU8-1126-SM-5EQ5K 9.4
GTEX-ZF28-2526-SM-57WFH 9.2
GTEX-13X6I-2726-SM-5Q5ET 9.1
GTEX-WYVS-1126-SM-4SOJX 9.0
GTEX-14E6C-2226-SM-5QGQG 8.9
GTEX-117YX-0526-SM-5EGJH 8.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.2
Samples: 196

Max RPKM: 15.1
Min RPKM: 4.4
Std RPKM: 1.8
Median RPKM: 9.1
GTEX-144GM-1226-SM-5LU52 15.1
GTEX-11P82-1026-SM-5BC5J 14.7
GTEX-133LE-1526-SM-5IFEN 13.1
GTEX-OXRK-1726-SM-3NB16 13.0
GTEX-ZF2S-1926-SM-4WWAN 12.9
GTEX-P4PP-1426-SM-3NM9L 12.5
GTEX-11TT1-1026-SM-5PNW7 12.3
GTEX-U3ZN-2126-SM-4DXU1 12.3
Show all