ATXN3

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.2 FPKM
GTEx:2.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA024123

 

Antibody CAB021976

 

Endothelial cells

Medium   High  

Glandular cells

High   High  

Peripheral nerve/ganglion

High   High  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

7.2

overview Male, age 54
Sample 1
FPKM: 6.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 9.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 8.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 5.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.8
Samples: 149

Max RPKM: 4.4
Min RPKM: 1.7
Std RPKM: 0.5
Median RPKM: 2.8
GTEX-13OW6-2226-SM-5N9FL 4.4
GTEX-14E6C-2226-SM-5QGQG 4.3
GTEX-13PVQ-2726-SM-5L3H7 4.1
GTEX-13N2G-2226-SM-5IJCU 4.0
GTEX-13X6K-2726-SM-5O9DG 4.0
GTEX-145LS-2926-SM-5O99G 4.0
GTEX-ZVT4-2626-SM-5N9GJ 4.0
GTEX-13SLW-2826-SM-5Q5ES 3.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.4
Samples: 196

Max RPKM: 4.6
Min RPKM: 1.2
Std RPKM: 0.6
Median RPKM: 2.3
GTEX-11P81-1126-SM-5GU5G 4.6
GTEX-ZYFC-2626-SM-5NQ6S 4.2
GTEX-XXEK-1926-SM-4BRVD 4.1
GTEX-14AS3-1126-SM-5Q5CR 4.0
GTEX-13O3O-2526-SM-5L3DR 3.8
GTEX-U3ZH-1326-SM-4DXSF 3.8
GTEX-14BMV-2426-SM-5S2PP 3.7
GTEX-V955-1626-SM-4JBHJ 3.7
Show all