SMARCD1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:16.8 FPKM
GTEx:14.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA004101

 

Endothelial cells

Low  

Glandular cells

High  

Peripheral nerve/ganglion

Not detected  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

16.8

overview Male, age 54
Sample 1
FPKM: 13.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 14.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 14.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 10.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 13.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 20.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 31.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

14.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 14.1
Samples: 149

Max RPKM: 19.3
Min RPKM: 8.9
Std RPKM: 2.2
Median RPKM: 14.3
GTEX-14E6C-2226-SM-5QGQG 19.3
GTEX-13PL7-2426-SM-5J2N3 18.9
GTEX-13OW6-2226-SM-5N9FL 18.7
GTEX-13PVQ-2726-SM-5L3H7 18.5
GTEX-14A5I-2426-SM-5Q5CP 18.5
GTEX-XUW1-1826-SM-4BOQD 18.4
GTEX-13N2G-2226-SM-5IJCU 18.2
GTEX-145MH-2726-SM-5QGQ6 18.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 14.1
Samples: 196

Max RPKM: 19.6
Min RPKM: 4.4
Std RPKM: 1.8
Median RPKM: 14
GTEX-R53T-1326-SM-48FCQ 19.6
GTEX-11TUW-2026-SM-5EQL8 17.9
GTEX-X5EB-0926-SM-46MVT 17.8
GTEX-13OVI-2026-SM-5J1MU 17.5
GTEX-13U4I-2426-SM-5LU34 17.5
GTEX-146FQ-1926-SM-5NQBY 17.4
GTEX-148VJ-2626-SM-5QGPI 17.4
GTEX-WQUQ-2526-SM-4MVNO 17.1
Show all