CDON

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:2.5 FPKM
GTEx:5.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA017377

 

Antibody CAB012422

 

Endothelial cells

Low   Not detected  

Glandular cells

High   Low  

Peripheral nerve/ganglion

Low   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

2.5

overview Male, age 54
Sample 1
FPKM: 3.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 2.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 1.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 7.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 8.3
Samples: 149

Max RPKM: 18
Min RPKM: 2.6
Std RPKM: 2.7
Median RPKM: 8.1
GTEX-13D11-0626-SM-5LZYY 18.0
GTEX-ZV6S-1126-SM-57WE9 17.9
GTEX-131XG-1526-SM-5GCNQ 17.0
GTEX-111CU-1226-SM-5EGIN 14.3
GTEX-13O61-1526-SM-5KM3P 13.8
GTEX-XV7Q-2226-SM-4BRVY 13.4
GTEX-ZYFG-1826-SM-5GZWX 13.1
GTEX-XUZC-1526-SM-4BRV4 13.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.3
Samples: 196

Max RPKM: 16.5
Min RPKM: 0
Std RPKM: 3.4
Median RPKM: 1.8
GTEX-ZV6S-1226-SM-59HLH 16.5
GTEX-ZYFG-1926-SM-5GID5 13.1
GTEX-13FH7-1526-SM-5J2N6 12.5
GTEX-RWS6-1826-SM-47JXX 10.6
GTEX-Y114-1526-SM-4TT79 10.2
GTEX-11ZVC-2126-SM-5EGJ1 10.1
GTEX-TKQ1-0626-SM-4DXTS 10.1
GTEX-U3ZH-1326-SM-4DXSF 10.1
Show all