HAGH

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:20.7 FPKM
GTEx:14.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Not available

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA043041

 

Antibody HPA061143

 

Antibody CAB033531

 

Endothelial cells

Medium   Low   Low  

Glandular cells

High   Low   Low  

Peripheral nerve/ganglion

Medium   Not available   Not detected  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

20.7

overview Male, age 54
Sample 1
FPKM: 19.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 23.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 20.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 23.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 18.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 22.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 16.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

14.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 15.3
Samples: 149

Max RPKM: 29.1
Min RPKM: 8.8
Std RPKM: 3.5
Median RPKM: 15
GTEX-1399U-2226-SM-5KLZI 29.1
GTEX-ZLFU-1426-SM-4WWEU 23.8
GTEX-ZVT2-1726-SM-51MRO 23.1
GTEX-ZG7Y-1826-SM-4WWD3 22.3
GTEX-XQ8I-2326-SM-4BOQC 21.7
GTEX-ZAJG-2626-SM-5S2NU 21.5
GTEX-XUJ4-2126-SM-4BOOX 21.4
GTEX-ZT9W-1726-SM-51MS3 21.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 12.7
Samples: 196

Max RPKM: 19.9
Min RPKM: 4
Std RPKM: 2.6
Median RPKM: 12.3
GTEX-ZV6S-1226-SM-59HLH 19.9
GTEX-V955-1626-SM-4JBHJ 19.5
GTEX-X5EB-0926-SM-46MVT 18.6
GTEX-13S86-1626-SM-5Q5C5 18.3
GTEX-117YX-0826-SM-5H11J 17.9
GTEX-1399R-2226-SM-5P9JB 17.9
GTEX-13FH7-1526-SM-5J2N6 17.9
GTEX-12WSL-1626-SM-5GCMU 17.4
Show all