SNRNP40

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:17.2 FPKM
GTEx:5.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA026527

 

Antibody HPA027345

 

Endothelial cells

High   Medium  

Glandular cells

High   High  

Peripheral nerve/ganglion

High   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

17.2

overview Male, age 54
Sample 1
FPKM: 13.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 16.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 17.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 11.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 18.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 20.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 23.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.3
Samples: 149

Max RPKM: 7.8
Min RPKM: 3.5
Std RPKM: 0.7
Median RPKM: 5.3
GTEX-11WQK-2526-SM-5CVL8 7.8
GTEX-132AR-2826-SM-5IJFV 7.6
GTEX-YJ8A-1726-SM-5P9IQ 7.5
GTEX-11TT1-0926-SM-5GU5M 7.0
GTEX-1399U-2226-SM-5KLZI 7.0
GTEX-ZTTD-2626-SM-57WEX 7.0
GTEX-1339X-1726-SM-5P9J9 6.9
GTEX-ZLFU-1426-SM-4WWEU 6.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.8
Samples: 196

Max RPKM: 10.9
Min RPKM: 2.4
Std RPKM: 1.2
Median RPKM: 5.7
GTEX-R53T-1326-SM-48FCQ 10.9
GTEX-146FQ-1926-SM-5NQBY 9.6
GTEX-11TT1-1026-SM-5PNW7 9.2
GTEX-QDVN-1326-SM-48TZ3 9.2
GTEX-QMRM-1226-SM-447C6 9.0
GTEX-1399R-2226-SM-5P9JB 8.9
GTEX-144GN-1126-SM-5LU33 8.8
GTEX-XV7Q-2126-SM-4BRVX 8.7
Show all