PRDM1

GENE INFORMATION

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Gene name

PRDM1 (HGNC Symbol)

Synonyms

BLIMP1, PRDI-BF1

Description

PR domain containing 1, with ZNF domain (HGNC Symbol)

Entrez gene summary

This gene encodes a protein that acts as a repressor of beta-interferon gene expression. The protein binds specifically to the PRDI (positive regulatory domain I element) of the beta-IFN gene promoter. Transcription of this gene increases upon virus induction. Two alternatively spliced transcript variants that encode different isoforms have been reported. [provided by RefSeq, Jul 2008]

Chromosome

6

Cytoband

q21

Chromosome location (bp)

106086320 - 106109939

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000057657 (version 78.38)

Entrez gene

639

UniProt

O75626 (UniProt - Evidence at protein level)

neXtProt

NX_O75626

Antibodypedia

PRDM1 antibodies
 

PROTEIN VIEW

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PRDM1-001
 
PRDM1-002
 
PRDM1-004
 
PRDM1-006
 
PRDM1-007
 
PRDM1-201
 
 
 
 
 

PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

PRDM1-001 ENSP00000358092
ENST00000369096
O75626
Show all »
Show » Show » 825 91.8 No 0
PRDM1-002 ENSP00000358085
ENST00000369089
O75626
Show all »
Show » Show » 691 76.8 No 0
PRDM1-004 ENSP00000358087
ENST00000369091
O75626
Show all »
Show » Show » 789 88 No 0
PRDM1-006 ENSP00000395566
ENST00000424894
B2REA5
Show all »
Show » 63 7.1 No 0
PRDM1-007 ENSP00000399772
ENST00000450060
B2REA4
Show all »
Show » Show » 171 20 No 0
PRDM1-201 ENSP00000478294
ENST00000613999
B2REA5
Show all »
Show » Show » 788 87.8 No 0