CP

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:8.9 FPKM
GTEx:4.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001834

 

Antibody CAB008591

 

Endothelial cells

Low   Not detected  

Glandular cells

Low   Not detected  

Peripheral nerve/ganglion

Low   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

8.9

overview Male, age 54
Sample 1
FPKM: 3.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 11.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 2.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 9.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 22.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 5.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.5
Samples: 149

Max RPKM: 31.7
Min RPKM: 0
Std RPKM: 4.1
Median RPKM: 1.9
GTEX-13OVJ-1826-SM-5KM2D 31.7
GTEX-WFON-1326-SM-4LVMN 21.2
GTEX-145LS-2926-SM-5O99G 14.9
GTEX-XUZC-1526-SM-4BRV4 14.1
GTEX-14C39-1626-SM-5S2P4 12.4
GTEX-ZPU1-1726-SM-4WWFV 12.3
GTEX-11P81-1426-SM-5P9JN 12.0
GTEX-YJ8A-1726-SM-5P9IQ 11.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.5
Samples: 196

Max RPKM: 49.5
Min RPKM: 0.4
Std RPKM: 5
Median RPKM: 3.1
GTEX-ZXES-1626-SM-5NQ7L 49.5
GTEX-13O3O-2526-SM-5L3DR 24.1
GTEX-13O3P-2326-SM-5KM55 23.4
GTEX-11ONC-2026-SM-5HL61 17.0
GTEX-145ME-0826-SM-5O9AF 15.4
GTEX-13OVJ-1726-SM-5IJDZ 15.3
GTEX-1339X-1626-SM-5IJDN 14.7
GTEX-ZYVF-2826-SM-5GIDK 14.3
Show all