TRIO

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:10.8 FPKM
GTEx:10.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA008157

 

Endothelial cells

Low  

Glandular cells

Medium  

Peripheral nerve/ganglion

Low  
 

COLON - HPA RNA-seq

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Average FPKM

10.8

overview Male, age 54
Sample 1
FPKM: 9.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 11.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 9.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 14.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 8.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 13.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

10.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 10.9
Samples: 149

Max RPKM: 22.4
Min RPKM: 5.6
Std RPKM: 3
Median RPKM: 10.2
GTEX-131XG-1526-SM-5GCNQ 22.4
GTEX-14E6C-2226-SM-5QGQG 21.9
GTEX-11I78-1326-SM-5PNY9 20.1
GTEX-14A5H-1626-SM-5SIAN 20.1
GTEX-XAJ8-0726-SM-47JY5 19.8
GTEX-ZXES-1726-SM-5E43G 18.7
GTEX-11TUW-2326-SM-5EQMO 17.8
GTEX-132AR-2826-SM-5IJFV 17.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 10.5
Samples: 196

Max RPKM: 20.6
Min RPKM: 4.1
Std RPKM: 2.4
Median RPKM: 10.3
GTEX-ZY6K-1226-SM-5GZYL 20.6
GTEX-13CF3-1426-SM-5K7YY 20.5
GTEX-11TUW-2026-SM-5EQL8 19.9
GTEX-XAJ8-0426-SM-47JYJ 18.9
GTEX-QLQ7-1126-SM-4R1KN 18.3
GTEX-11WQK-2126-SM-5EQME 17.5
GTEX-ZVT2-1926-SM-5GU5T 16.0
GTEX-131XG-1826-SM-5LZV4 15.3
Show all