MRI1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.6 FPKM
GTEx:9.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA042744

 

Antibody CAB045988

 

Endothelial cells

Low   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

7.6

overview Male, age 54
Sample 1
FPKM: 6.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 9.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 7.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 5.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 8.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

9.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 9.5
Samples: 149

Max RPKM: 24.1
Min RPKM: 3.3
Std RPKM: 3.1
Median RPKM: 9.4
GTEX-145LS-2926-SM-5O99G 24.1
GTEX-13SLW-2826-SM-5Q5ES 19.6
GTEX-XUW1-1826-SM-4BOQD 18.0
GTEX-XUZC-1526-SM-4BRV4 15.9
GTEX-ZYY3-2226-SM-5E45A 15.6
GTEX-XV7Q-2226-SM-4BRVY 15.2
GTEX-12WSG-2426-SM-5EQLZ 15.1
GTEX-X15G-1526-SM-4PQZM 14.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.9
Samples: 196

Max RPKM: 17.6
Min RPKM: 3.5
Std RPKM: 2.5
Median RPKM: 10
GTEX-145LS-2726-SM-5Q5D8 17.6
GTEX-13W3W-2126-SM-5K7UX 16.3
GTEX-RWS6-1826-SM-47JXX 16.0
GTEX-QEL4-1926-SM-4R1JI 15.4
GTEX-WHWD-1226-SM-4OOS1 15.4
GTEX-ZLV1-1226-SM-4WWBX 15.4
GTEX-XQ8I-2126-SM-4BOOM 15.3
GTEX-1128S-1626-SM-5H12O 14.7
Show all