VCL

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:21.1 FPKM
GTEx:28.7 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Medium
Keratinocytes:Medium
Langerhans:Low
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA002131

 

Antibody CAB002453

 

Fibroblasts

Medium   Medium  

Keratinocytes

High   Medium  

Langerhans

Low   Medium  

Melanocytes

High   Medium  
   
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 
 

Antibody staining

Antibody HPA002131

 

Antibody CAB002453

 

Epidermal cells

Medium   Medium  
      
      
      
   
   
   

SKIN - HPA RNA-seq

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Average FPKM

21.1

overview Female, age 34
Sample 1
FPKM: 23.6
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 23.9
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 15.9

SKIN - GTEx RNA-seq

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Average RPKM

28.7

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 26.2
Samples: 250

Max RPKM: 59.7
Min RPKM: 11.2
Std RPKM: 6.9
Median RPKM: 25.8
GTEX-14E6C-2426-SM-5S2NF 59.7
GTEX-X4EP-0626-SM-3P621 51.9
GTEX-12ZZX-2426-SM-5GCOE 48.4
GTEX-WYBS-0626-SM-3NMAS 48.4
GTEX-12WSL-2026-SM-5GCML 45.0
GTEX-WHSE-0126-SM-3NMBT 41.2
GTEX-ZVE2-2826-SM-5GU51 41.2
GTEX-12584-0726-SM-5FQTK 40.7
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 31.3
Samples: 357

Max RPKM: 90.5
Min RPKM: 13.3
Std RPKM: 9.8
Median RPKM: 30
GTEX-ZTPG-0326-SM-5O9AX 90.5
GTEX-13CF2-2526-SM-5LZYX 70.6
GTEX-V1D1-2226-SM-3NMAX 70.4
GTEX-11DXZ-2326-SM-5EGGV 68.4
GTEX-X4XY-0226-SM-4E3IZ 65.7
GTEX-OOBK-0126-SM-2YUND 60.9
GTEX-ZZPT-0226-SM-5E43X 59.1
GTEX-12584-0126-SM-5EGKQ 58.7
Show all