VCL

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:64.5 FPKM
GTEx:110.9 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA002131

 

Antibody CAB002453

 

Endothelial cells

Medium   Medium  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Not available   Low  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

64.5

overview Male, age 54
Sample 1
FPKM: 42.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 38.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 32.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 36.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 43.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 211.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 46.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

110.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 141.2
Samples: 149

Max RPKM: 275.8
Min RPKM: 61.8
Std RPKM: 42.5
Median RPKM: 137.9
GTEX-11P7K-1826-SM-5HL5A 275.8
GTEX-XXEK-1826-SM-4BRVC 269.0
GTEX-XAJ8-0726-SM-47JY5 245.8
GTEX-11EM3-1626-SM-5N9CO 242.5
GTEX-ZQG8-2426-SM-57WEE 240.9
GTEX-11ZTT-1626-SM-5EQKR 236.4
GTEX-ZXES-1726-SM-5E43G 235.4
GTEX-13U4I-2626-SM-5SI9C 223.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 80.6
Samples: 196

Max RPKM: 236.7
Min RPKM: 20.6
Std RPKM: 55.2
Median RPKM: 62.8
GTEX-XAJ8-0426-SM-47JYJ 236.7
GTEX-SNMC-1126-SM-4DM5M 232.3
GTEX-XGQ4-1226-SM-4AT67 216.0
GTEX-U3ZH-1326-SM-4DXSF 211.8
GTEX-14AS3-1126-SM-5Q5CR 205.0
GTEX-14ICL-1226-SM-5S2RD 204.3
GTEX-TKQ1-0626-SM-4DXTS 203.0
GTEX-13FH7-1526-SM-5J2N6 199.5
Show all