ABCF2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:13.6 FPKM
GTEx:12.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA020091

 

Antibody HPA021815

 

Antibody HPA030388

 

Antibody CAB020682

 

Endothelial cells

Medium   Low   Low   Low  

Glandular cells

High   Medium   Medium   Not detected  

Peripheral nerve/ganglion

Low   High   Low   Low  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

13.6

overview Male, age 54
Sample 1
FPKM: 9.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 14.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 13.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 11.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 17.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 14.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 14.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

12.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 13.4
Samples: 149

Max RPKM: 35.5
Min RPKM: 6.5
Std RPKM: 4.1
Median RPKM: 12.9
GTEX-13O1R-2426-SM-5KLZZ 35.5
GTEX-11TT1-0926-SM-5GU5M 28.9
GTEX-11WQK-2526-SM-5CVL8 25.9
GTEX-11TUW-2326-SM-5EQMO 24.9
GTEX-1339X-1726-SM-5P9J9 24.8
GTEX-11I78-1326-SM-5PNY9 24.2
GTEX-12WSL-1826-SM-5LZW9 23.1
GTEX-14A5H-1626-SM-5SIAN 21.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 12.1
Samples: 196

Max RPKM: 29.8
Min RPKM: 4.5
Std RPKM: 3.4
Median RPKM: 11.6
GTEX-11TUW-2026-SM-5EQL8 29.8
GTEX-11WQK-2126-SM-5EQME 26.7
GTEX-1339X-1626-SM-5IJDN 23.2
GTEX-X5EB-0926-SM-46MVT 22.7
GTEX-ZYVF-2826-SM-5GIDK 21.6
GTEX-ZY6K-1226-SM-5GZYL 19.2
GTEX-11EQ9-1426-SM-5987G 19.0
GTEX-XXEK-1926-SM-4BRVD 19.0
Show all