MIPEP

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:10.8 FPKM
GTEx:4.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA030676

 

Antibody HPA031669

 

Antibody HPA031670

 

Endothelial cells

Medium   Not detected   Medium  

Glandular cells

Medium   Medium   Medium  

Peripheral nerve/ganglion

Medium   Not detected   Low  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

10.8

overview Male, age 54
Sample 1
FPKM: 7.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 9.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 12.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 6.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 13.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 17.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.4
Samples: 149

Max RPKM: 6.7
Min RPKM: 1.4
Std RPKM: 1
Median RPKM: 3.4
GTEX-11TT1-0926-SM-5GU5M 6.7
GTEX-131XG-1526-SM-5GCNQ 6.3
GTEX-XAJ8-0726-SM-47JY5 5.8
GTEX-XBED-1726-SM-47JYO 5.8
GTEX-1122O-1426-SM-5H11R 5.3
GTEX-1399U-2226-SM-5KLZI 5.3
GTEX-ZVT2-1726-SM-51MRO 5.3
GTEX-11DXX-1926-SM-5EGJK 5.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.5
Samples: 196

Max RPKM: 10.7
Min RPKM: 1.2
Std RPKM: 2.1
Median RPKM: 5.5
GTEX-O5YT-1426-SM-3MJHC 10.7
GTEX-T5JW-1126-SM-4DM5V 10.6
GTEX-YF7O-1726-SM-5IFJ9 10.6
GTEX-146FQ-1926-SM-5NQBY 10.3
GTEX-U3ZN-2126-SM-4DXU1 9.7
GTEX-U4B1-1126-SM-4DXV3 9.6
GTEX-XV7Q-2126-SM-4BRVX 9.3
GTEX-PWOO-1326-SM-48TCJ 9.1
Show all