NR1H3

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:13.4 FPKM
GTEx:9.0 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA036443

 

Antibody CAB037109

 

Endothelial cells

Low   Low  

Glandular cells

Low   Medium  

Peripheral nerve/ganglion

Low   Medium  
   
   

COLON - HPA RNA-seq

? »

Average FPKM

13.4

overview Male, age 54
Sample 1
FPKM: 7.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 12.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 12.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 23.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 13.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 9.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 15.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

9.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 6.4
Samples: 149

Max RPKM: 16.3
Min RPKM: 1.3
Std RPKM: 3.1
Median RPKM: 5.8
GTEX-13SLW-2826-SM-5Q5ES 16.3
GTEX-1477Z-2126-SM-5Q5CM 16.0
GTEX-145LS-2926-SM-5O99G 15.9
GTEX-14A5I-2426-SM-5Q5CP 15.3
GTEX-147GR-2826-SM-5RQK8 15.1
GTEX-13X6I-2726-SM-5Q5ET 14.9
GTEX-139D8-2926-SM-5IJBM 14.3
GTEX-ZYY3-2226-SM-5E45A 13.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 11.5
Samples: 196

Max RPKM: 23
Min RPKM: 1.8
Std RPKM: 4.4
Median RPKM: 11.9
GTEX-WOFM-2026-SM-4OOSQ 23.0
GTEX-XQ8I-2126-SM-4BOOM 21.8
GTEX-ZLV1-1226-SM-4WWBX 21.7
GTEX-13W3W-2126-SM-5K7UX 21.6
GTEX-13D11-0826-SM-5KLZJ 19.9
GTEX-U3ZN-2126-SM-4DXU1 19.8
GTEX-1399R-2226-SM-5P9JB 19.5
GTEX-Y9LG-1526-SM-4WWDR 19.0
Show all