VSIG2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:86.5 FPKM
GTEx:30.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA035919

 

Antibody HPA050147

 

Endothelial cells

Low   Not detected  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Low   Medium  
   
   

COLON - HPA RNA-seq

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Average FPKM

86.5

overview Male, age 54
Sample 1
FPKM: 132.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 127.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 77.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 47.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 72.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 53.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 95.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

30.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.8
Samples: 149

Max RPKM: 33.4
Min RPKM: 0
Std RPKM: 3.8
Median RPKM: 0.9
GTEX-Y5LM-1426-SM-5RQJL 33.4
GTEX-V955-1726-SM-4JBHF 22.0
GTEX-11ONC-1926-SM-5GU75 16.4
GTEX-XBED-1726-SM-47JYO 16.1
GTEX-11EQ9-1526-SM-5PNY7 10.7
GTEX-YJ8A-1726-SM-5P9IQ 8.5
GTEX-146FH-2426-SM-5Q5EW 8.2
GTEX-13CF2-1826-SM-5N9GK 5.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 59.0
Samples: 196

Max RPKM: 203.8
Min RPKM: 0.2
Std RPKM: 46.8
Median RPKM: 67.8
GTEX-UJHI-1126-SM-4IHLN 203.8
GTEX-11DXZ-1726-SM-5H12M 185.8
GTEX-145MN-1726-SM-5SIA6 154.3
GTEX-131XE-0826-SM-5HL9W 154.1
GTEX-U3ZN-2126-SM-4DXU1 147.1
GTEX-XUJ4-2026-SM-4BOOW 146.6
GTEX-1399R-2226-SM-5P9JB 144.2
GTEX-S7SF-1926-SM-4AT5B 137.6
Show all