MDH1

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:113.7 FPKM
GTEx:53.3 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA027296

 

Antibody HPA054276

 

Antibody CAB047333

 

Endothelial cells

Not detected   Low   Low  

Glandular cells

Low   Medium   Low  

Peripheral nerve/ganglion

Not detected   Not detected   Not detected  
     
     
     

COLON - HPA RNA-seq

? »

Average FPKM

113.7

overview Male, age 54
Sample 1
FPKM: 83.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 96.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 98.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 94.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 92.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 178.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 152.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

53.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 54.2
Samples: 149

Max RPKM: 91.4
Min RPKM: 17.6
Std RPKM: 11.5
Median RPKM: 54.2
GTEX-YEC3-2026-SM-4WWFL 91.4
GTEX-13CF2-1826-SM-5N9GK 83.8
GTEX-13G51-2126-SM-5IJD9 80.4
GTEX-ZPIC-2626-SM-57WE2 76.1
GTEX-ZP4G-1526-SM-57WE5 76.0
GTEX-14E6E-1726-SM-5S2R6 75.8
GTEX-1399U-2226-SM-5KLZI 75.4
GTEX-ZDTS-2726-SM-5L3E2 74.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 52.5
Samples: 196

Max RPKM: 77.6
Min RPKM: 24.1
Std RPKM: 10
Median RPKM: 53.6
GTEX-Y3IK-1826-SM-4WWDS 77.6
GTEX-Y8LW-1226-SM-4WWDP 76.1
GTEX-T5JW-1126-SM-4DM5V 75.9
GTEX-1399R-2226-SM-5P9JB 72.8
GTEX-U4B1-1126-SM-4DXV3 71.4
GTEX-SNMC-1126-SM-4DM5M 71.0
GTEX-XV7Q-2126-SM-4BRVX 70.7
GTEX-13VXT-2426-SM-5LU46 70.2
Show all