MVP

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:107.3 FPKM
GTEx:71.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Not available

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA002321

 

Antibody CAB002752

 

Antibody CAB022717

 

Endothelial cells

Medium   Medium   High  

Glandular cells

High   High   High  

Peripheral nerve/ganglion

Not available   Not available   High  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

107.3

overview Male, age 54
Sample 1
FPKM: 95.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 116.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 139.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 143.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 89.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 84.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 80.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

71.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 39.7
Samples: 149

Max RPKM: 80.1
Min RPKM: 20
Std RPKM: 14
Median RPKM: 34.8
GTEX-WI4N-2226-SM-4OOS9 80.1
GTEX-12WSL-1826-SM-5LZW9 79.1
GTEX-11TT1-0926-SM-5GU5M 76.3
GTEX-13OVJ-1826-SM-5KM2D 74.5
GTEX-13O1R-2426-SM-5KLZZ 73.6
GTEX-11TUW-2326-SM-5EQMO 69.8
GTEX-14A5H-1626-SM-5SIAN 68.6
GTEX-13FHO-2726-SM-5K7VG 68.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 102.3
Samples: 196

Max RPKM: 233.4
Min RPKM: 21.1
Std RPKM: 49.8
Median RPKM: 109.8
GTEX-1399R-2226-SM-5P9JB 233.4
GTEX-131XG-1826-SM-5LZV4 224.6
GTEX-14E6E-1526-SM-5RQIG 188.8
GTEX-111CU-1426-SM-5GZYP 182.8
GTEX-Q2AI-0926-SM-48U1F 182.2
GTEX-XUZC-1326-SM-4BRV2 179.1
GTEX-Y5LM-1526-SM-4VDTA 176.6
GTEX-U4B1-1126-SM-4DXV3 176.5
Show all