CALCOCO1

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:100.4 FPKM
GTEx:79.8 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Medium
Keratinocytes:High
Langerhans:High
Melanocytes:High
 

Antibody staining

Antibody HPA038313

 

Antibody HPA038314

 

Fibroblasts

Medium   Not detected  

Keratinocytes

High   Not detected  

Langerhans

High   Medium  

Melanocytes

High   Medium  
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 
 

Antibody staining

Antibody HPA038313

 

Antibody HPA038314

 

Epidermal cells

Medium   Not detected  
      
      
      
   
   

SKIN - HPA RNA-seq

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Average FPKM

100.4

overview Female, age 34
Sample 1
FPKM: 100.5
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 109.4
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 91.3

SKIN - GTEx RNA-seq

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Average RPKM

79.8

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 77.4
Samples: 250

Max RPKM: 167.3
Min RPKM: 34.5
Std RPKM: 20.8
Median RPKM: 73.9
GTEX-ZVT2-0126-SM-5GIDQ 167.3
GTEX-ZAB4-2126-SM-5HL8U 154.2
GTEX-XUW1-0926-SM-4BONX 131.5
GTEX-139T8-0626-SM-5KLZX 127.7
GTEX-11LCK-2226-SM-5HL4Q 120.9
GTEX-XAJ8-1426-SM-47JYM 119.7
GTEX-XV7Q-1826-SM-4BRUV 115.6
GTEX-ZYY3-2926-SM-5GIEB 115.1
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 82.3
Samples: 357

Max RPKM: 157.8
Min RPKM: 36.8
Std RPKM: 21.4
Median RPKM: 79.1
GTEX-147F3-0526-SM-5SI98 157.8
GTEX-PLZ5-2026-SM-2S1O4 152.7
GTEX-ZYY3-0126-SM-5GZY5 143.4
GTEX-Y8LW-1826-SM-5S2MV 141.5
GTEX-U3ZN-2326-SM-3DB7W 141.3
GTEX-ZXES-1826-SM-5E43S 139.2
GTEX-TSE9-0126-SM-3DB83 138.0
GTEX-11VI4-1726-SM-5CVLH 135.7
Show all