CALCOCO1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:24.4 FPKM
GTEx:61.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA038313

 

Antibody HPA038314

 

Endothelial cells

Medium   High  

Glandular cells

Medium   Low  

Peripheral nerve/ganglion

Medium   Not available  
   
   

COLON - HPA RNA-seq

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Average FPKM

24.4

overview Male, age 54
Sample 1
FPKM: 24.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 25.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 16.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 21.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 24.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 35.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 23.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

61.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 72.6
Samples: 149

Max RPKM: 125.8
Min RPKM: 21.4
Std RPKM: 19.4
Median RPKM: 72.1
GTEX-XUW1-1826-SM-4BOQD 125.8
GTEX-13OW5-2826-SM-5KM1G 113.6
GTEX-ZVT4-2626-SM-5N9GJ 109.9
GTEX-XQ8I-2326-SM-4BOQC 109.7
GTEX-XV7Q-2226-SM-4BRVY 109.1
GTEX-13O61-1526-SM-5KM3P 108.8
GTEX-ZAB5-1426-SM-5HL9D 104.1
GTEX-13OVI-2126-SM-5KM3U 103.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 49.7
Samples: 196

Max RPKM: 107.5
Min RPKM: 11.4
Std RPKM: 22.4
Median RPKM: 45
GTEX-13OVI-2026-SM-5J1MU 107.5
GTEX-ZV6S-1226-SM-59HLH 107.5
GTEX-V955-1626-SM-4JBHJ 105.3
GTEX-145MO-2426-SM-5NQ9W 104.1
GTEX-YEC4-1926-SM-5IFHJ 99.8
GTEX-S341-1426-SM-4AD6U 99.7
GTEX-T6MO-0826-SM-4DM51 99.6
GTEX-RWS6-1826-SM-47JXX 97.4
Show all