CSDE1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:184.9 FPKM
GTEx:148.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA018846

 

Antibody HPA052221

 

Endothelial cells

Low   Not available  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Low   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

184.9

overview Male, age 54
Sample 1
FPKM: 152.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 222.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 190.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 159.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 219.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 189.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 161.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

148.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 184.4
Samples: 149

Max RPKM: 280.3
Min RPKM: 75.4
Std RPKM: 38.9
Median RPKM: 190.5
GTEX-12BJ1-2026-SM-5FQUH 280.3
GTEX-12WSG-2426-SM-5EQLZ 268.2
GTEX-ZF28-2526-SM-57WFH 265.1
GTEX-14E6E-1726-SM-5S2R6 261.9
GTEX-11P7K-1826-SM-5HL5A 247.2
GTEX-131XG-1526-SM-5GCNQ 245.8
GTEX-117YX-0526-SM-5EGJH 244.8
GTEX-ZPIC-2626-SM-57WE2 244.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 113.0
Samples: 196

Max RPKM: 274.4
Min RPKM: 52.3
Std RPKM: 50.3
Median RPKM: 91.2
GTEX-ZV6S-1226-SM-59HLH 274.4
GTEX-13CF3-1426-SM-5K7YY 254.9
GTEX-12WSL-1626-SM-5GCMU 233.1
GTEX-RWS6-1826-SM-47JXX 229.1
GTEX-Z93S-2426-SM-5HL8N 228.2
GTEX-T6MO-0826-SM-4DM51 225.3
GTEX-14ICL-1226-SM-5S2RD 217.6
GTEX-14AS3-1126-SM-5Q5CR 217.5
Show all