RALA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:24.5 FPKM
GTEx:10.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA065232

 

Endothelial cells

Medium  

Glandular cells

Medium  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

24.5

overview Male, age 54
Sample 1
FPKM: 25.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 25.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 28.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 26.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 18.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 19.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 28.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

10.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 9.2
Samples: 149

Max RPKM: 14.3
Min RPKM: 5.4
Std RPKM: 1.9
Median RPKM: 9
GTEX-147GR-2826-SM-5RQK8 14.3
GTEX-145LS-2926-SM-5O99G 14.0
GTEX-12ZZY-2726-SM-5EQ45 13.9
GTEX-11WQK-2526-SM-5CVL8 13.4
GTEX-ZYT6-2826-SM-5GICX 13.4
GTEX-13X6K-2726-SM-5O9DG 13.2
GTEX-ZE7O-2626-SM-51MSS 13.2
GTEX-ZF28-2526-SM-57WFH 13.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 12.5
Samples: 196

Max RPKM: 26.8
Min RPKM: 5.7
Std RPKM: 3.5
Median RPKM: 12.3
GTEX-11TT1-1026-SM-5PNW7 26.8
GTEX-14E6E-1526-SM-5RQIG 23.7
GTEX-ZYWO-1626-SM-5E44H 23.4
GTEX-U4B1-1126-SM-4DXV3 20.9
GTEX-139YR-2126-SM-5KM11 20.5
GTEX-Q2AI-0926-SM-48U1F 20.2
GTEX-111CU-1426-SM-5GZYP 19.7
GTEX-1399R-2226-SM-5P9JB 19.3
Show all