HCCS

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:8.6 FPKM
GTEx:8.2 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Low
Langerhans:Low
Melanocytes:Low
 

Antibody staining

Antibody HPA002946

 

Fibroblasts

Not detected  

Keratinocytes

Not detected  

Langerhans

Not detected  

Melanocytes

Not detected  
 
 

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 
 

Antibody staining

Antibody HPA002946

 

Epidermal cells

Medium  
    
    
    
 
 

SKIN - HPA RNA-seq

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Average FPKM

8.6

overview Female, age 34
Sample 1
FPKM: 9.4
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 9.2
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 7.3

SKIN - GTEx RNA-seq

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Average RPKM

8.2

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 8.0
Samples: 250

Max RPKM: 12.6
Min RPKM: 4.9
Std RPKM: 1.3
Median RPKM: 7.9
GTEX-144GL-0626-SM-5LU4D 12.6
GTEX-V1D1-2026-SM-3GAF4 11.2
GTEX-13FTY-2126-SM-5IFFB 11.1
GTEX-13OW5-2326-SM-5L3HO 11.1
GTEX-148VJ-0626-SM-5LUAW 11.1
GTEX-139UW-0326-SM-5J1ML 10.9
GTEX-ZAJG-1526-SM-5CVML 10.8
GTEX-1269C-0126-SM-5EQ5L 10.6
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 8.5
Samples: 357

Max RPKM: 13.2
Min RPKM: 4.2
Std RPKM: 1.4
Median RPKM: 8.5
GTEX-11WQK-0526-SM-5EQLD 13.2
GTEX-PVOW-0126-SM-2XCFA 13.1
GTEX-ZU9S-0226-SM-5E441 13.0
GTEX-1122O-2126-SM-5EGIR 12.5
GTEX-11WQC-2526-SM-5CVLE 11.8
GTEX-12ZZX-0126-SM-5EGK9 11.7
GTEX-OXRP-0126-SM-3NB32 11.7
GTEX-S7SF-1626-SM-3K2AY 11.7
Show all