CFTR

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:35.9 FPKM
GTEx:6.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA021939

 

Antibody CAB001951

 

Endothelial cells

Low   Medium  

Glandular cells

Low   Low  

Peripheral nerve/ganglion

Low   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

35.9

overview Male, age 54
Sample 1
FPKM: 44.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 54.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 42.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 33.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 20.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 23.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 31.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

6.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.2
Samples: 149

Max RPKM: 6.5
Min RPKM: 0
Std RPKM: 0.8
Median RPKM: 0
GTEX-YJ8A-1726-SM-5P9IQ 6.5
GTEX-Y5LM-1426-SM-5RQJL 4.4
GTEX-XBED-1726-SM-47JYO 4.0
GTEX-11ONC-1926-SM-5GU75 3.7
GTEX-V955-1726-SM-4JBHF 3.1
GTEX-146FH-2426-SM-5Q5EW 1.9
GTEX-11EQ9-1526-SM-5PNY7 1.7
GTEX-WQUQ-2626-SM-4MVNP 1.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 12.0
Samples: 196

Max RPKM: 32.1
Min RPKM: 0
Std RPKM: 9.4
Median RPKM: 13.2
GTEX-13S86-1626-SM-5Q5C5 32.1
GTEX-ZYWO-1626-SM-5E44H 31.5
GTEX-R53T-1326-SM-48FCQ 30.8
GTEX-U4B1-1126-SM-4DXV3 29.0
GTEX-132AR-2726-SM-5PNVN 28.3
GTEX-PLZ5-1126-SM-3P613 27.9
GTEX-XMK1-1726-SM-4B64Z 27.9
GTEX-WFG7-1526-SM-4LVMG 27.2
Show all