CFH

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:43.8 FPKM
GTEx:15.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA038922

 

Antibody HPA049176

 

Antibody HPA053326

 

Antibody CAB016385

 

Antibody CAB016769

 

Endothelial cells

Low   Not detected   Not detected   Low   Not detected  

Glandular cells

Low   Medium   Not detected   Not detected   Not detected  

Peripheral nerve/ganglion

Not detected   Not available   Not available   Not detected   Not detected  
         
         

COLON - HPA RNA-seq

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Average FPKM

43.8

overview Male, age 54
Sample 1
FPKM: 27.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 47.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 19.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 34.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 117.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 24.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 36.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

15.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 13.2
Samples: 149

Max RPKM: 64.9
Min RPKM: 2.4
Std RPKM: 9.7
Median RPKM: 10.4
GTEX-YJ8A-1726-SM-5P9IQ 64.9
GTEX-WFON-1326-SM-4LVMN 51.6
GTEX-13X6I-2726-SM-5Q5ET 45.4
GTEX-13OVJ-1826-SM-5KM2D 43.0
GTEX-WQUQ-2626-SM-4MVNP 38.1
GTEX-11DXX-1926-SM-5EGJK 35.7
GTEX-ZAB4-2426-SM-5HL8A 32.5
GTEX-WI4N-2226-SM-4OOS9 31.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 16.8
Samples: 196

Max RPKM: 75.9
Min RPKM: 2.9
Std RPKM: 12.5
Median RPKM: 12.8
GTEX-13O3P-2326-SM-5KM55 75.9
GTEX-13O3O-2526-SM-5L3DR 73.3
GTEX-147JS-2526-SM-5S2Q8 59.5
GTEX-ZAB4-2226-SM-5HL97 59.5
GTEX-145ME-0826-SM-5O9AF 55.7
GTEX-11O72-2226-SM-5PNW2 54.8
GTEX-ZXES-1626-SM-5NQ7L 54.4
GTEX-12KS4-2426-SM-5LU8P 53.9
Show all