SIN3A

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:11.8 FPKM
GTEx:5.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA047213

 

Antibody HPA062123

 

Antibody CAB004506

 

Endothelial cells

Low   Low   Low  

Glandular cells

Medium   Medium   Medium  

Peripheral nerve/ganglion

Medium   Not available   Medium  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

11.8

overview Male, age 54
Sample 1
FPKM: 11.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 14.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 13.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 8.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 11.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 13.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.5
Samples: 149

Max RPKM: 10.9
Min RPKM: 1.5
Std RPKM: 2
Median RPKM: 5.5
GTEX-131XG-1526-SM-5GCNQ 10.9
GTEX-139T6-1426-SM-5P9J7 9.9
GTEX-13111-1926-SM-5GCOL 9.7
GTEX-13OVI-2126-SM-5KM3U 9.3
GTEX-ZPIC-2626-SM-57WE2 9.2
GTEX-11P81-1426-SM-5P9JN 9.0
GTEX-12BJ1-2026-SM-5FQUH 8.9
GTEX-13PVR-1726-SM-5Q5EC 8.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.9
Samples: 196

Max RPKM: 9.7
Min RPKM: 1.6
Std RPKM: 1.5
Median RPKM: 4.5
GTEX-11P81-1126-SM-5GU5G 9.7
GTEX-TKQ1-0626-SM-4DXTS 9.4
GTEX-XXEK-1926-SM-4BRVD 9.2
GTEX-ZV6S-1226-SM-59HLH 9.0
GTEX-U3ZH-1326-SM-4DXSF 8.7
GTEX-T6MO-0826-SM-4DM51 8.3
GTEX-YEC4-1926-SM-5IFHJ 8.3
GTEX-12WSL-1626-SM-5GCMU 8.1
Show all