CCDC112

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.4 FPKM
GTEx:3.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA045120

 

Antibody HPA050621

 

Endothelial cells

Medium   Low  

Glandular cells

Medium   Low  

Peripheral nerve/ganglion

Medium   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

7.4

overview Male, age 54
Sample 1
FPKM: 6.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 7.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 11.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 6.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 5.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 8.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.6
Samples: 149

Max RPKM: 4.5
Min RPKM: 1.1
Std RPKM: 0.6
Median RPKM: 2.7
GTEX-12ZZY-2726-SM-5EQ45 4.5
GTEX-ZE7O-2626-SM-51MSS 4.1
GTEX-1477Z-2126-SM-5Q5CM 4.0
GTEX-147GR-2826-SM-5RQK8 4.0
GTEX-131YS-2926-SM-5EGKI 3.9
GTEX-12ZZW-2426-SM-5DUWE 3.8
GTEX-WHPG-1626-SM-4M1ZL 3.8
GTEX-YJ8O-1426-SM-5PNV9 3.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.3
Samples: 196

Max RPKM: 8.2
Min RPKM: 0.9
Std RPKM: 1.5
Median RPKM: 4.2
GTEX-133LE-1526-SM-5IFEN 8.2
GTEX-147F3-1926-SM-5SIB9 7.9
GTEX-R53T-1326-SM-48FCQ 7.8
GTEX-132AR-2726-SM-5PNVN 7.5
GTEX-11DXZ-1726-SM-5H12M 7.4
GTEX-WFG7-1526-SM-4LVMG 7.2
GTEX-13O21-2426-SM-5MR4A 7.1
GTEX-139YR-2126-SM-5KM11 7.0
Show all