TRAT1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:0.9 FPKM
GTEx:0.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA002356

 

Antibody CAB026130

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Not detected   Not detected  

Peripheral nerve/ganglion

Not available   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

0.9

overview Male, age 54
Sample 1
FPKM: 0.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.0
Samples: 149

Max RPKM: 1.1
Min RPKM: 0
Std RPKM: 0.1
Median RPKM: 0
GTEX-13X6I-2726-SM-5Q5ET 1.1
GTEX-ZAB4-2426-SM-5HL8A 1.1
GTEX-13X6K-2726-SM-5O9DG 0.8
GTEX-11ONC-1926-SM-5GU75 0.6
GTEX-11PRG-2026-SM-5GU5F 0.6
GTEX-146FH-2426-SM-5Q5EW 0.4
GTEX-148VJ-2426-SM-5NQ9Y 0.4
GTEX-145LS-2926-SM-5O99G 0.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.3
Samples: 196

Max RPKM: 2.6
Min RPKM: 0
Std RPKM: 0.3
Median RPKM: 0.1
GTEX-13OVJ-1726-SM-5IJDZ 2.6
GTEX-13O3O-2526-SM-5L3DR 1.6
GTEX-12KS4-2426-SM-5LU8P 1.2
GTEX-147JS-2526-SM-5S2Q8 1.2
GTEX-13OW6-2126-SM-5N9GL 1.1
GTEX-11NSD-1626-SM-5986U 1.0
GTEX-Q2AH-1226-SM-48TZL 1.0
GTEX-12C56-0626-SM-5EGGC 0.9
Show all